Global connections in the tree root microbiome

The Tree Root Microbiome Project covers countries where radiata pine grows either naturally or as an introduced species. An international soil sampling initiative is underway: soil data is correlated with related environmental data and DNA information extracted from soil and root micro-organisms. Soil samples are sent from all countries to the Woodwell Climate Research Center, USA, to be analysed, while extracted DNA samples come to Scion.

A team including Scion researchers recently visited the Monterey region of California to collect soil samples from native radiata or ‘Monterey’ pine remnants there. A future trip will visit Mexico, to sample soils in native radiata pine populations in Guadalupe and Cedros Islands

People collecting soil samples around the world use a GPS-linked smartphone app to record the sampling site, and the app then pulls in environmental data for that site. Scientists can then look for links between climate factors – precipitation, temperature, hours of daylight and so on – and soil data, and the microbiome.

The aim is to compare the microbiome data from radiata’s home range with other countries, to see if there is a core microbiome that exists wherever radiata is in the world.

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